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    G1 transmembrane protein G1P-related 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824342, updated on 18-Sep-2024

    Summary

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    Official Symbol
    G1
    Official Full Name
    transmembrane protein G1P-related 1
    Primary source
    TAIR:AT3G51790
    Locus tag
    AT3G51790
    See related
    Araport:AT3G51790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A. thaliana homolog of E. coli CcmE; AtCCME; ATG1; transmembrane protein G1P-related 1
    Summary
    Encodes a heme-binding protein located in the mitochondrial inner membrane that is involved in cytochrome c maturation.
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (19209515..19210849, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat (TPR)-containing protein Neighboring gene BCL-2-associated athanogene 4 Neighboring gene metallopeptidase M24 family protein Neighboring gene ncRNA Neighboring gene Stress induced protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CCME, a nuclear-encoded heme-binding protein involved in cytochrome c maturation in plant mitochondria. Spielewoy N, et al. J Biol Chem, 2001 Feb 23. PMID 11069919
    2. AUTOPHAGY-RELATED11 plays a critical role in general autophagy- and senescence-induced mitophagy in Arabidopsis. Li F, et al. Plant Cell, 2014 Feb. PMID 24563201, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_115038.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytochrome c-heme linkage IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein G1P-related 1
    NP_190747.1
    • transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19209515..19210849 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115038.3 → NP_190747.1  transmembrane protein G1P-related 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190747.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96326
      UniProtKB/TrEMBL
      A0A178VIZ9
      Conserved Domains (1) summary
      pfam03100
      Location:80 → 229
      CcmE; CcmE
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96326.1

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