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    • Showing Current items.

    F38B7.3 PH domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179585, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F38B7.3
    Official Full Name
    PH domain-containing protein
    Primary source
    WormBase:WBGene00009534
    Locus tag
    CELE_F38B7.3
    See related
    AllianceGenome:WB:WBGene00009534
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in regulation of cell differentiation. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F38B7.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (11549107..11551613)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CX domain-containing protein Neighboring gene PheST operon leader peptide PheM Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ubiquitinyl hydrolase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulation of cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PH domain-containing protein
    NP_505929.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11549107..11551613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073528.6 → NP_505929.1  PH domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505929.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20151
      Conserved Domains (2) summary
      PHA03378
      Location:146 → 216
      PHA03378; EBNA-3B; Provisional
      pfam00169
      Location:22 → 132
      PH; PH domain
    Nucleotide Protein
    Heading Accession and Version

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