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    Cnfn cornifelin [ Rattus norvegicus (Norway rat) ]

    Gene ID: 365217, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cnfnprovided by RGD
    Official Full Name
    cornifelinprovided by RGD
    Primary source
    RGD:1563577
    See related
    EnsemblRapid:ENSRNOG00000020530 AllianceGenome:RGD:1563577
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563577
    Summary
    Predicted to be active in cornified envelope. Orthologous to human CNFN (cornifelin). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 592.8), Kidney (RPKM 182.0) and 7 other tissues See more
    Orthologs
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    Genomic context

    See Cnfn in Genome Data Viewer
    Location:
    1q21
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (90079409..90081556, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (80949699..80953747, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (82234032..82236602, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene proline rich 19 Neighboring gene uncharacterized LOC134482973 Neighboring gene transmembrane protein 145 Neighboring gene multiple EGF-like-domains 8 Neighboring gene uncharacterized LOC120096895 Neighboring gene lipase E, hormone sensitive type Neighboring gene C-X-C motif chemokine ligand 17

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108909.1NP_001102379.1  cornifelin

      See identical proteins and their annotated locations for NP_001102379.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473979
      UniProtKB/TrEMBL
      A6J955, D3Z8G9
      Related
      ENSRNOP00000027845.4, ENSRNOT00000027845.7
      Conserved Domains (1) summary
      TIGR01571
      Location:34122
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      90079409..90081556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063269060.1XP_063125130.1  cornifelin isoform X2

      UniProtKB/TrEMBL
      A6J956
    2. XM_063269052.1XP_063125122.1  cornifelin isoform X1

      UniProtKB/TrEMBL
      A6J955, D3Z8G9