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    OXS2 CCCH-type zinc finger protein with ARM repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818790, updated on 18-Sep-2024

    Summary

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    Official Symbol
    OXS2
    Official Full Name
    CCCH-type zinc finger protein with ARM repeat domain-containing protein
    Primary source
    TAIR:AT2G41900
    Locus tag
    AT2G41900
    See related
    Araport:AT2G41900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    OXIDATIVE STRESS 2; T6D20.20; T6D20_20; tandem zinc finger protein 7; TZF7
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    Genomic context

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    See OXS2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (17490271..17493922)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A C-terminal fragment of Arabidopsis OXIDATIVE STRESS 2 can play a positive role in salt tolerance. Cai J, et al. Biochem Biophys Res Commun, 2021 Jun 4. PMID 33836344
    2. Stress tolerance to stress escape in plants: role of the OXS2 zinc-finger transcription factor family. Blanvillain R, et al. EMBO J, 2011 Aug 9. PMID 21829164, Free PMC Article
    3. OXS2 is Required for Salt Tolerance Mainly through Associating with Salt Inducible Genes, CA1 and Araport11, in Arabidopsis. Jing Y, et al. Sci Rep, 2019 Dec 30. PMID 31889067, Free PMC Article
    4. Nucleocytoplasmic OXIDATIVE STRESS 2 can relocate FLOWERING LOCUS T. Liang M, et al. Biochem Biophys Res Commun, 2019 Oct 1. PMID 31420167
    5. Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID. Mair A, et al. Elife, 2019 Sep 19. PMID 31535972, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129754.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CCCH-type zinc finger protein with ARM repeat domain-containing protein
    NP_565962.1
    • CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17490271..17493922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129754.4 → NP_565962.1  CCCH-type zinc finger protein with ARM repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565962.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93755, Q94C18
      UniProtKB/TrEMBL
      A0A178VPY5
      Conserved Domains (4) summary
      smart00356
      Location:302 → 326
      ZnF_C3H1; zinc finger
      cd00204
      Location:48 → 182
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:49 → 159
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:74 → 123
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P93755.2

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