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    BAM7 beta-amylase 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819196, updated on 18-Sep-2024

    Summary

    Official Symbol
    BAM7
    Official Full Name
    beta-amylase 7
    Primary source
    TAIR:AT2G45880
    Locus tag
    AT2G45880
    See related
    Araport:AT2G45880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    BETA-AMYLASE 4; beta-amylase 7; BMY4; F4I18.14
    Summary
    Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays.
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    Genomic context

    See BAM7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Sequence:
    Chromosome: 2; NC_003071.7 (18878518..18882995, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Bestrophin-like protein Neighboring gene RHO guanyl-nucleotide exchange factor 4 Neighboring gene Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein

    Interactions

    General gene information

    NM_130151.7

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region  
    located_in nucleus PubMed 

    General protein information

    Preferred Names
    beta-amylase 7
    NP_182112.2
    • beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18878518..18882995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130151.7 → NP_182112.2  beta-amylase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182112.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80831, Q0WU61
      UniProtKB/TrEMBL
      A0A5S9X7D3, A0A654F2B9
      Conserved Domains (1) summary
      PLN02905
      Location:1 → 682
      PLN02905; beta-amylase
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