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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819094, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT2G44850
    Locus tag
    AT2G44850
    See related
    Araport:AT2G44850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13E15.14
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (18498672..18500879)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribosomal protein L24e family protein Neighboring gene ncRNA Neighboring gene replicase polyprotein 1ab protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001161108.1
    NM_001337100.1
    NM_130049.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001154580.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); Has 106 Blast hits to 106 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_182012.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18498672..18500879
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130049.1 → NP_182012.1  uncharacterized protein AT2G44850 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182012.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X720, A0A654FCJ3, O22166
      Conserved Domains (1) summary
      pfam10561
      Location:123 → 362
      UPF0565; uncharacterized protein family UPF0565

    2. NM_001161108.1 → NP_001154580.1  uncharacterized protein AT2G44850 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154580.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EJA6, F4IV28, Q0WT67
      Conserved Domains (1) summary
      pfam10561
      Location:42 → 281
      UPF0565; Uncharacterized protein family UPF0565

    3. NM_001337100.1 → NP_001324614.1  uncharacterized protein AT2G44850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EJA6, F4IV28, Q0WT67
      Conserved Domains (1) summary
      pfam10561
      Location:42 → 281
      UPF0565; Uncharacterized protein family UPF0565
    Nucleotide Protein
    Heading Accession and Version

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