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    Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819307, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pectinacetylesterase family protein
    Primary source
    TAIR:AT2G46930
    Locus tag
    AT2G46930
    See related
    Araport:AT2G46930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14M4.24; PAE3; pectin acetylesterase 3
    Summary
    Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (19283456..19286400)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein Neighboring gene DUF3754 family protein, putative (DUF3754) Neighboring gene Protein phosphatase 2C family protein Neighboring gene fold protein Neighboring gene ncRNA Neighboring gene cytochrome P450, family 709, subfamily B, polypeptide 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and functional characterization of the distinct plant pectin esterases PAE8 and PAE9 and their deletion mutants. de Souza A, et al. Planta, 2014 Nov. PMID 25115560, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130261.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pectin acetylesterase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables pectin acetylesterase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell wall organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pectinacetylesterase family protein
    NP_182216.1
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 557 Blast hits to 549 proteins in 96 species: Archae - 0; Bacteria - 48; Metazoa - 118; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19283456..19286400
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130261.3 → NP_182216.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182216.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80731
      UniProtKB/TrEMBL
      A0A178VSS1, A0A7G2EEK7
      Conserved Domains (1) summary
      pfam03283
      Location:45 → 397
      PAE; Pectinacetylesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80731.1

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