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    Cation efflux family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819395, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cation efflux family protein
    Primary source
    TAIR:AT2G47830
    Locus tag
    AT2G47830
    See related
    Araport:AT2G47830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17A22.22
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    11
    Sequence:
    Chromosome: 2; NC_003071.7 (19590816..19594014, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene multidrug resistance-associated protein 4 Neighboring gene nuclear factor Y, subunit B5 Neighboring gene arginine-glutamic acid dipeptide repeat protein Neighboring gene putative conserved protein ycf60 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337276.1
    NM_130350.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cation efflux family protein
    NP_001318443.1
    • Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT3G58060.1); Has 9392 Blast hits to 9378 proteins in 2385 species: Archae - 234; Bacteria - 7700; Metazoa - 297; Fungi - 408; Plants - 275; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink).
    NP_182304.2
    • Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT3G58060.1); Has 9484 Blast hits to 9472 proteins in 2416 species: Archae - 234; Bacteria - 7791; Metazoa - 296; Fungi - 408; Plants - 276; Viruses - 0; Other Eukaryotes - 479 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19590816..19594014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337276.1 → NP_001318443.1  Cation efflux family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPX5, A0A2H1ZE44, A0A384LQL2

    2. NM_130350.3 → NP_182304.2  Cation efflux family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182304.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82250, Q8L725
      UniProtKB/TrEMBL
      A0A5S9X861
      Conserved Domains (3) summary
      COG0053
      Location:72 → 367
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]
      pfam01545
      Location:86 → 285
      Cation_efflux; Cation efflux family
      pfam16916
      Location:294 → 366
      ZT_dimer; Dimerization domain of Zinc Transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L725.1

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