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    NPSN11 Putative plant snare 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818086, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NPSN11
    Official Full Name
    Putative plant snare 11
    Primary source
    TAIR:AT2G35190
    Locus tag
    AT2G35190
    See related
    Araport:AT2G35190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNPSN11; novel plant snare 11; NSPN11; T4C15.14; T4C15_14
    Summary
    plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.
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    Genomic context

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    See NPSN11 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (14830626..14833417)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Histone H3 K4-specific methyltransferase SET7/9 family protein Neighboring gene miscRNA Neighboring gene DUF740 family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NPSN11 is a cell plate-associated SNARE protein that interacts with the syntaxin KNOLLE. Zheng H, et al. Plant Physiol, 2002 Jun. PMID 12068098, Free PMC Article
    2. SNARE complexes of different composition jointly mediate membrane fusion in Arabidopsis cytokinesis. El Kasmi F, et al. Mol Biol Cell, 2013 May. PMID 23515225, Free PMC Article
    3. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
    4. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129072.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables SNAP receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytokinesis by cell plate formation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cell plate IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    Putative plant snare 11
    NP_565800.1
    • novel plant snare 11 (NPSN11); FUNCTIONS IN: protein transporter activity, SNAP receptor activity; INVOLVED IN: cytokinesis; LOCATED IN: plasma membrane, cell plate; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Sec20 (InterPro:IPR005606); BEST Arabidopsis thaliana protein match is: novel plant snare 13 (TAIR:AT3G17440.1); Has 871 Blast hits to 814 proteins in 236 species: Archae - 12; Bacteria - 157; Metazoa - 137; Fungi - 78; Plants - 153; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14830626..14833417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129072.4 → NP_565800.1  Putative plant snare 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565800.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82173, Q944A9
      UniProtKB/TrEMBL
      A0A178VVE6, A0A5S9X460
      Conserved Domains (2) summary
      COG1196
      Location:6 → 114
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15861
      Location:141 → 205
      SNARE_SNAP25N_23N_29N_SEC9N; N-terminal SNARE motif of SNAP25, SNAP23, SNAP29, and SEC9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q944A9.2

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