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    ENTH/VHS family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818918, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ENTH/VHS family protein
    Primary source
    TAIR:AT2G43160
    Locus tag
    AT2G43160
    See related
    Araport:AT2G43160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14B2.10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    14
    Sequence:
    Chromosome: 2; NC_003071.7 (17947800..17953669)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene ncRNA Neighboring gene Proline-rich extensin-like family protein Neighboring gene ncRNA Neighboring gene Phosphoenolpyruvate carboxylase family protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene ribonuclease P family protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPSIN1 and MTV1 define functionally overlapping but molecularly distinct trans-Golgi network subdomains in Arabidopsis. Heinze L, et al. Proc Natl Acad Sci U S A, 2020 Oct 13. PMID 32989160, Free PMC Article
    2. EpsinR2 interacts with clathrin, adaptor protein-3, AtVTI12, and phosphatidylinositol-3-phosphate. Implications for EpsinR2 function in protein trafficking in plant cells. Lee GJ, et al. Plant Physiol, 2007 Apr. PMID 17277094, Free PMC Article
    3. Protein and metabolite composition of Arabidopsis stress granules. Kosmacz M, et al. New Phytol, 2019 May. PMID 30664249
    4. Isolation and identification of ubiquitin-related proteins from Arabidopsis seedlings. Igawa T, et al. J Exp Bot, 2009. PMID 19429840, Free PMC Article
    5. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036458.2
    NM_001337018.1
    NM_180055.3
    NM_180056.2
    NM_201946.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables clathrin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phospholipid binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cell plate IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasmic stress granule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ENTH/VHS family protein
    NP_001031535.1
    • ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_850386.1
    • ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 18929 Blast hits to 13912 proteins in 880 species: Archae - 58; Bacteria - 1548; Metazoa - 8281; Fungi - 4113; Plants - 1702; Viruses - 130; Other Eukaryotes - 3097 (source: NCBI BLink).
    NP_850387.1
    • ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 18931 Blast hits to 13914 proteins in 881 species: Archae - 58; Bacteria - 1550; Metazoa - 8281; Fungi - 4113; Plants - 1702; Viruses - 130; Other Eukaryotes - 3097 (source: NCBI BLink).
    NP_973675.1
    • ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17947800..17953669
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180055.3 → NP_850386.1  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850386.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q570B8, Q67YI9, Q67YS3, Q94A14, Q9ZW78, Q9ZW79
      UniProtKB/TrEMBL
      A0A178VZ34, A0A5S9X736, A0A654F1F5
      Conserved Domains (3) summary
      PHA03247
      Location:366 → 707
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:142 → 280
      PRK12678; transcription termination factor Rho; Provisional
      cd03571
      Location:26 → 142
      ENTH; Epsin N-Terminal Homology (ENTH) domain family

    2. NM_201946.4 → NP_973675.1  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973675.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q570B8, Q67YI9, Q67YS3, Q94A14, Q9ZW78, Q9ZW79
      UniProtKB/TrEMBL
      A0A178VZ34, A0A5S9X736, A0A654F1F5
      Conserved Domains (3) summary
      PHA03247
      Location:366 → 707
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:142 → 280
      PRK12678; transcription termination factor Rho; Provisional
      cd03571
      Location:26 → 142
      ENTH; Epsin N-Terminal Homology (ENTH) domain family

    3. NM_001337018.1 → NP_001325306.1  ENTH/VHS family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q570B8, Q67YI9, Q67YS3, Q94A14, Q9ZW78, Q9ZW79
      UniProtKB/TrEMBL
      A0A178VZ34, A0A5S9X736, A0A654F1F5
      Conserved Domains (3) summary
      PHA03247
      Location:366 → 707
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:142 → 280
      PRK12678; transcription termination factor Rho; Provisional
      cd03571
      Location:26 → 142
      ENTH; Epsin N-Terminal Homology (ENTH) domain family

    4. NM_001036458.2 → NP_001031535.1  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031535.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67YI9
      Conserved Domains (3) summary
      cd03571
      Location:27 → 146
      ENTH_epsin; ENTH domain, Epsin family; The epsin (Eps15 interactor) N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated ...
      pfam08648
      Location:183 → 271
      DUF1777; Protein of unknown function (DUF1777)
      pfam12871
      Location:185 → 260
      PRP38_assoc; Pre-mRNA-splicing factor 38-associated hydrophilic C-term

    5. NM_180056.2 → NP_850387.1  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850387.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q570B8, Q67YI9, Q67YS3, Q94A14, Q9ZW78, Q9ZW79
      UniProtKB/TrEMBL
      A0A178VZ34, A0A5S9X736, A0A654F1F5
      Conserved Domains (3) summary
      PHA03247
      Location:366 → 707
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:142 → 280
      PRK12678; transcription termination factor Rho; Provisional
      cd03571
      Location:26 → 142
      ENTH; Epsin N-Terminal Homology (ENTH) domain family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67YI9.1

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