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    nucleolar protein gar2-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818833, updated on 18-Sep-2024

    Summary

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    Official Full Name
    nucleolar protein gar2-like protein
    Primary source
    TAIR:AT2G42320
    Locus tag
    AT2G42320
    See related
    Araport:AT2G42320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MHK10.4; MHK10_4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (17627331..17630797)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein Neighboring gene ncRNA Neighboring gene GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein Neighboring gene ncRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036454.3
    NM_001336966.1
    NM_001336967.1
    NM_129794.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nucleolar protein gar2-like protein
    NP_001031531.1
    • nucleolar protein gar2-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_181761.1
    • nucleolar protein gar2-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57780.1); Has 15829 Blast hits to 1361 proteins in 222 species: Archae - 4; Bacteria - 14530; Metazoa - 601; Fungi - 195; Plants - 122; Viruses - 6; Other Eukaryotes - 371 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17627331..17630797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036454.3 → NP_001031531.1  nucleolar protein gar2-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031531.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VR14, Q9SLC7
      Conserved Domains (2) summary
      cl00920
      Location:173 → 259
      Cob_adeno_trans; Cobalamin adenosyltransferase
      cl03379
      Location:509 → 558
      Myo5-like_CBD; Cargo binding domain of myosin 5 and similar proteins

    2. NM_001336966.1 → NP_001325179.1  nucleolar protein gar2-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2E0

    3. NM_001336967.1 → NP_001325180.1  nucleolar protein gar2-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2E0

    4. NM_129794.2 → NP_181761.1  nucleolar protein gar2-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181761.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VR14, Q9SLC7
      Conserved Domains (2) summary
      cl00920
      Location:173 → 259
      Cob_adeno_trans; Cobalamin adenosyltransferase
      cl03379
      Location:509 → 558
      Myo5-like_CBD; Cargo binding domain of myosin 5 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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