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    P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816180, updated on 18-Sep-2024

    Summary

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    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT2G16790
    Locus tag
    AT2G16790
    See related
    Araport:AT2G16790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T24I21.20; T24I21_20
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (7283928..7285345, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Calcium-dependent phosphotriesterase superfamily protein Neighboring gene Basic-leucine zipper (bZIP) transcription factor family protein Neighboring gene Transducin family protein / WD-40 repeat family protein Neighboring gene high-affinity nickel-transport family protein Neighboring gene F-box and associated interaction domains-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001124859.1
    NM_001335491.1
    NM_001335492.1
    NM_127231.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables gluconokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in D-gluconate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_001118331.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: shikimate kinase activity, kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623), Carbohydrate kinase, thermoresistant glucokinase (InterPro:IPR006001); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_565393.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: shikimate kinase activity, kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623), Carbohydrate kinase, thermoresistant glucokinase (InterPro:IPR006001); Has 2254 Blast hits to 2254 proteins in 918 species: Archae - 9; Bacteria - 1822; Metazoa - 57; Fungi - 155; Plants - 35; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7283928..7285345 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335490.1 → NP_001325318.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2T4, A0A7G2ECR7

    2. NM_127231.2 → NP_565393.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565393.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDN6, Q9SLE0
      UniProtKB/TrEMBL
      A0A7G2ECR7
      Conserved Domains (1) summary
      COG3265
      Location:15 → 185
      GntK; Gluconate kinase [Carbohydrate transport and metabolism]

    3. NM_001124859.1 → NP_001118331.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118331.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2ECR7, B3H6H9
      Conserved Domains (2) summary
      COG0703
      Location:10 → 187
      AroK; Shikimate kinase [Amino acid transport and metabolism]
      COG3265
      Location:13 → 183
      GntK; Gluconate kinase [Carbohydrate transport and metabolism]

    4. NM_001335492.1 → NP_001325317.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDN6, Q9SLE0
      UniProtKB/TrEMBL
      A0A7G2ECR7
      Conserved Domains (1) summary
      COG3265
      Location:15 → 185
      GntK; Gluconate kinase [Carbohydrate transport and metabolism]

    5. NM_001335491.1 → NP_001325316.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2W6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SLE0.2

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