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    ELMO/CED-12 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839448, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ELMO/CED-12 family protein
    Primary source
    TAIR:AT1G03620
    Locus tag
    AT1G03620
    See related
    Araport:AT1G03620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21B7.23
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (904032..907643, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene photosystem II family protein Neighboring gene plant/protein (DUF789) Neighboring gene protochlorophyllide oxidoreductase C Neighboring gene tRNA-Phe Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ELMO/CED-12 family protein
    NP_171859.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT3G03610.1); Has 828 Blast hits to 828 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 41; Plants - 178; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      904032..907643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331429.1 → NP_001321016.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    2. NM_100242.3 → NP_171859.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171859.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    3. NM_001331428.1 → NP_001321013.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APK4, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:36 → 203
      ELMO_CED12; ELMO/CED-12 family

    4. NM_001331427.1 → NP_001321014.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APK4, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:36 → 203
      ELMO_CED12; ELMO/CED-12 family

    5. NM_001331430.1 → NP_001321015.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    6. NM_001331424.1 → NP_001321021.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    7. NM_001331423.1 → NP_001321022.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    8. NM_001331434.1 → NP_001321019.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    9. NM_001331433.1 → NP_001321020.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    10. NM_001331432.1 → NP_001321017.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family

    11. NM_001331431.1 → NP_001321018.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APK4, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:36 → 203
      ELMO_CED12; ELMO/CED-12 family

    12. NM_001331425.1 → NP_001321012.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APM3, A0A7G2DQY4
      Conserved Domains (1) summary
      pfam04727
      Location:100 → 267
      ELMO_CED12; ELMO/CED-12 family

    13. NM_001331426.1 → NP_001321023.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF8, A0A384KX04, A2RVK8, Q9LR62
      Conserved Domains (1) summary
      pfam04727
      Location:68 → 235
      ELMO_CED12; ELMO/CED-12 family
    Nucleotide Protein
    Heading Accession and Version

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