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    Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841914, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Major facilitator superfamily protein
    Primary source
    TAIR:AT1G54730
    Locus tag
    AT1G54730
    See related
    Araport:AT1G54730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T22H22.15; T22H22_15
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    17
    Sequence:
    Chromosome: 1; NC_003070.9 (20424332..20430194)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene autophagy 18h-like protein Neighboring gene ncRNA Neighboring gene early-responsive to dehydration protein-related / ERD protein-like protein Neighboring gene FANTASTIC four-like protein (DUF3049) Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001333665.1
    NM_001333666.1
    NM_001333667.1
    NM_001333669.1
    NM_001333670.1
    NM_001333671.1
    NM_001333672.1
    NM_001333673.1
    NM_104349.2
    NM_180633.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Major facilitator superfamily protein
    NP_001319233.1
    • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 23568 Blast hits to 23366 proteins in 1753 species: Archae - 455; Bacteria - 9572; Metazoa - 4390; Fungi - 6076; Plants - 2075; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink).
    NP_564666.1
    • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 386 Blast hits to 385 proteins in 60 species: Archae - 0; Bacteria - 8; Metazoa - 50; Fungi - 28; Plants - 299; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_850964.1
    • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 30738 Blast hits to 30251 proteins in 2131 species: Archae - 585; Bacteria - 14306; Metazoa - 5298; Fungi - 6561; Plants - 2647; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20424332..20430194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333668.1 → NP_001323199.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWE2, A0A7G2DY22

    2. NM_001333667.1 → NP_001319233.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZED1, A0A7G2E0X5

    3. NM_001333669.1 → NP_001323200.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWE3, A0A7G2DY22

    4. NM_180633.2 → NP_850964.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850964.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3ECP7, Q8H197, Q940K3, Q9ZVM0
      UniProtKB/TrEMBL
      A0A5S9WPQ5, A0A654EJX8, A0A7G2E0X5
      Conserved Domains (1) summary
      cd17358
      Location:37 → 460
      MFS_GLUT6_8_Class3_like; Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily

    5. NM_001333670.1 → NP_001323198.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNC8, A0A1P8AWA4, A0A384LEZ5
      Conserved Domains (1) summary
      cl28910
      Location:37 → 313
      MFS; Major Facilitator Superfamily

    6. NM_001333671.1 → NP_001323197.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWE1

    7. NM_001333673.1 → NP_001323195.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWE1

    8. NM_001333672.1 → NP_001323196.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWA9

    9. NM_001333665.1 → NP_001323201.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNC8, A0A1P8AWA4, A0A384LEZ5
      Conserved Domains (1) summary
      cl28910
      Location:37 → 313
      MFS; Major Facilitator Superfamily

    10. NM_001333666.1 → NP_001323194.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPK5, A0A1P8AWG7, A0A384LAL3

    11. NM_104349.2 → NP_564666.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564666.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3ECP7
      Conserved Domains (1) summary
      TIGR00879
      Location:1 → 61
      SP; MFS transporter, sugar porter (SP) family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ECP7.2

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