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    Zim17-type zinc finger protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843204, updated on 18-Sep-2024

    Summary

    Official Full Name
    Zim17-type zinc finger protein
    Primary source
    TAIR:AT1G68730
    Locus tag
    AT1G68730
    See related
    Araport:AT1G68730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J5.3; F24J5_3
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (25810321..25811180, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA arginine adenosine deaminase Neighboring gene uncharacterized protein Neighboring gene arabinogalactan protein 19 Neighboring gene miscRNA Neighboring gene EXS (ERD1/XPR1/SYG1) family protein

    General gene information

    NM_105545.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in plastid IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Zim17-type zinc finger protein
    NP_177040.2
    • Zim17-type zinc finger protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT5G27280.1); Has 375 Blast hits to 375 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 113; Plants - 110; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25810321..25811180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105545.3NP_177040.2  Zim17-type zinc finger protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177040.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBF4, A0A5S9WSS6, Q9S7X9
      Conserved Domains (1) summary
      pfam05180
      Location:107165
      zf-DNL; DNL zinc finger