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    Late embryogenesis abundant protein (LEA) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838866, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Late embryogenesis abundant protein (LEA) family protein
    Primary source
    TAIR:AT1G22600
    Locus tag
    AT1G22600
    See related
    Araport:AT1G22600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12K8.5; F12K8_5
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (7987141..7989217, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene AGAMOUS-like 87 Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene Phosphoinositide phosphatase family protein Neighboring gene SSUH2-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102107.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Late embryogenesis abundant protein (LEA) family protein
    NP_173674.1
    • Late embryogenesis abundant protein (LEA) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, embryo, sperm cell, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT1G72100.1); Has 169 Blast hits to 166 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 8; Plants - 85; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7987141..7989217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102107.2 → NP_173674.1  Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173674.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6I6, A0A5S9VJJ9, A0A654EE26, Q9SKA2
      Conserved Domains (1) summary
      pfam13664
      Location:199 → 299
      DUF4149; Domain of unknown function (DUF4149)
    Nucleotide Protein
    Heading Accession and Version

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