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    glycosyl hydrolase family 81 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838411, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glycosyl hydrolase family 81 protein
    Primary source
    TAIR:AT1G18310
    Locus tag
    AT1G18310
    See related
    Araport:AT1G18310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15H18.17; F15H18_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (6301200..6303956, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DUF4228 domain protein Neighboring gene nudix hydrolase homolog 4 Neighboring gene Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Neighboring gene Homeodomain-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables endo-1,3(4)-beta-glucanase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycosyl hydrolase family 81 protein
    NP_173267.1
    • glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: cell wall macromolecule catabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT5G15870.1); Has 441 Blast hits to 435 proteins in 142 species: Archae - 0; Bacteria - 86; Metazoa - 4; Fungi - 179; Plants - 58; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6301200..6303956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101689.1 → NP_173267.1  glycosyl hydrolase family 81 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173267.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHS9, F4IAQ0
      Conserved Domains (1) summary
      pfam03639
      Location:16 → 646
      Glyco_hydro_81; Glycosyl hydrolase family 81
    Nucleotide Protein
    Heading Accession and Version

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