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    SIT4 phosphatase-associated family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837314, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SIT4 phosphatase-associated family protein
    Primary source
    TAIR:AT1G07990
    Locus tag
    AT1G07990
    See related
    Araport:AT1G07990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6D22.8; T6D22_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    18
    Sequence:
    Chromosome: 1; NC_003070.9 (2476953..2483196)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nuclear factor Y, subunit C10 Neighboring gene uncharacterized protein Neighboring gene GATA transcription factor 10 Neighboring gene serine/threonine-protein phosphatase 6 regulatory subunit Neighboring gene GATA transcription factor 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_100673.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SIT4 phosphatase-associated family protein
    NP_172277.2
    • SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2476953..2483196
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331747.1 → NP_001322214.1  SIT4 phosphatase-associated family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATA9

    2. NM_100673.4 → NP_172277.2  SIT4 phosphatase-associated family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172277.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WNK4, Q8L7T5
      Conserved Domains (1) summary
      pfam04499
      Location:129 → 490
      SAPS; SIT4 phosphatase-associated protein
    Nucleotide Protein
    Heading Accession and Version

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