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    Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841582, updated on 18-Sep-2024

    Summary

    Official Full Name
    Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
    Primary source
    TAIR:AT1G51570
    Locus tag
    AT1G51570
    See related
    Araport:AT1G51570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19C24.20; F19C24_20
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (19122161..19125375, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Kelch repeat-containing F-box family protein Neighboring gene ncRNA Neighboring gene Pyridoxamine 5'-phosphate oxidase family protein Neighboring gene RNA-binding KH domain-containing protein Neighboring gene alpha-mannosidase 1 Neighboring gene ncRNA

    Bibliography

    General protein information

    Preferred Names
    Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
    NP_175568.1
    • Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 5701 Blast hits to 4098 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 3509; Fungi - 242; Plants - 1514; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19122161..19125375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104035.4NP_175568.1  Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175568.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93VL4, Q9C8H3
      UniProtKB/TrEMBL
      A0A178W7D8, A0A5S9WNU2, A0A654EIZ4
      Conserved Domains (4) summary
      cd04019
      Location:202352
      C2C_MCTP_PRT_plant; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cd08378
      Location:40164
      C2B_MCTP_PRT_plant; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cd08379
      Location:364493
      C2D_MCTP_PRT_plant; C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      pfam08372
      Location:621776
      PRT_C; Plant phosphoribosyltransferase C-terminal