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    RING finger protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839701, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RING finger protein
    Primary source
    TAIR:AT1G28080
    Locus tag
    AT1G28080
    See related
    Araport:AT1G28080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13K9.18; F13K9_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (9789691..9791546)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene B-box type zinc finger protein with CCT domain-containing protein Neighboring gene Pre-mRNA-splicing factor 3 Neighboring gene ATP-dependent RNA helicase Neighboring gene ncRNA Neighboring gene Polynucleotide adenylyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102573.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING finger protein
    NP_174129.2
    • RING finger protein; BEST Arabidopsis thaliana protein match is: RING finger protein (TAIR:AT5G13250.1); Has 133 Blast hits to 133 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9789691..9791546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332798.1 → NP_001320595.1  RING finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANB5, A0A5S9W7D4

    2. NM_102573.3 → NP_174129.2  RING finger protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174129.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W3K6, F4HUV9
    Nucleotide Protein
    Heading Accession and Version

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