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    SEC-C motif protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819655, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SEC-C motif protein
    Primary source
    TAIR:AT3G04950
    Locus tag
    AT3G04950
    See related
    Araport:AT3G04950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J14.10; T9J14_10
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (1371636..1373524)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene low-molecular-weight cysteine-rich 41 Neighboring gene low-molecular-weight cysteine-rich 18 Neighboring gene trichohyalin, putative (DUF3444) Neighboring gene DHHC-type zinc finger family protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_111367.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    SEC-C motif protein
    NP_187146.2
    • CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1371636..1373524
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111367.3 → NP_187146.2  SEC-C motif protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187146.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKQ1, A0A384KLF5, A0A5S9X9G6, A0A654F5K7, Q681W7
      Conserved Domains (2) summary
      COG3318
      Location:191 → 230
      YecA; Uncharacterized conserved protein YecA, UPF0149 family, contains C-terminal Zn-binding SEC-C motif [Function unknown]
      pfam02810
      Location:212 → 230
      SEC-C; SEC-C motif
    Nucleotide Protein
    Heading Accession and Version

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