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    organic solute transporter ostalpha protein (DUF300) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819764, updated on 18-Sep-2024

    Summary

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    Official Full Name
    organic solute transporter ostalpha protein (DUF300)
    Primary source
    TAIR:AT3G05940
    Locus tag
    AT3G05940
    See related
    Araport:AT3G05940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2O10.10
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (1777213..1780254, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene sugar transporter 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_111468.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    organic solute transporter ostalpha protein (DUF300)
    NP_187245.2
    • Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1777213..1780254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111468.5 → NP_187245.2  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187245.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V685, A0A384L8C2, Q9M9K7, Q9SFF8
      Conserved Domains (1) summary
      pfam03619
      Location:9 → 268
      Solute_trans_a; Organic solute transporter Ostalpha
    Nucleotide Protein
    Heading Accession and Version

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