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    protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819842, updated on 18-Sep-2024

    Summary

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    Official Full Name
    protein kinase family protein
    Primary source
    TAIR:AT3G06630
    Locus tag
    AT3G06630
    See related
    Araport:AT3G06630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8E24.13; T8E24_13
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (2069369..2074087, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene uncharacterized protein Neighboring gene DNA-binding enhancer protein-like protein Neighboring gene PAS domain-containing protein tyrosine kinase family protein Neighboring gene ncRNA Neighboring gene PAS domain-containing protein tyrosine kinase family protein Neighboring gene ATP-citrate lyase B-1 Neighboring gene fip1 motif-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337672.1
    NM_111539.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    protein kinase family protein
    NP_187315.1
    • protein kinase family protein; FUNCTIONS IN: two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), PAS-associated, C-terminal (InterPro:IPR000700), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06620.1); Has 127153 Blast hits to 125457 proteins in 4768 species: Archae - 339; Bacteria - 15978; Metazoa - 46871; Fungi - 11290; Plants - 33142; Viruses - 503; Other Eukaryotes - 19030 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2069369..2074087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337667.1 → NP_001326620.1  protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPU6, A0A654F654
      Conserved Domains (2) summary
      cd13999
      Location:440 → 686
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
      pfam00989
      Location:64 → 175
      PAS; PAS fold

    2. NM_001337670.1 → NP_001326622.1  protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VF96, A0A1I9LPU5, A0A384LGB1, A0A654F654

    3. NM_001337669.1 → NP_001326624.1  protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VF96, A0A1I9LPU5, A0A384LGB1, A0A654F654

    4. NM_001337668.1 → NP_001326619.1  protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VF96, A0A1I9LPU5, A0A384LGB1, A0A654F654

    5. NM_001337671.1 → NP_001326621.1  protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPU7, A0A654F654

    6. NM_111539.3 → NP_187315.1  protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187315.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VF28, A0A384L5P2, A0A654F654, Q9C547
      Conserved Domains (4) summary
      smart00221
      Location:434 → 671
      STYKc; Protein kinase; unclassified specificity
      cd00130
      Location:73 → 175
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      cd13999
      Location:440 → 671
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
      pfam00989
      Location:64 → 175
      PAS; PAS fold

    7. NM_001337672.1 → NP_001326623.1  protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPU9, A0A654F654
    Nucleotide Protein
    Heading Accession and Version

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