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    MFP1 MAR binding filament-like protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820845, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MFP1
    Official Full Name
    MAR binding filament-like protein 1
    Primary source
    TAIR:AT3G16000
    Locus tag
    AT3G16000
    See related
    Araport:AT3G16000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAR binding filament-like protein 1
    Summary
    encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.
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    Genomic context

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    See MFP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (5430758..5433851, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Coatomer, beta' subunit Neighboring gene ncRNA Neighboring gene sulfate transporter 3;4 Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene F-box associated ubiquitination effector protein Neighboring gene lectin protein kinase family protein Neighboring gene Translation machinery associated TMA7 Neighboring gene pyridoxine biosynthesis 1.2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual location of MAR-binding, filament-like protein 1 in Arabidopsis, tobacco, and tomato. Samaniego R, et al. Planta, 2006 May. PMID 16331467
    2. MFP1 is a thylakoid-associated, nucleoid-binding protein with a coiled-coil structure. Jeong SY, et al. Nucleic Acids Res, 2003 Sep 1. PMID 12930969, Free PMC Article
    3. Two Plastidial Coiled-Coil Proteins Are Essential for Normal Starch Granule Initiation in Arabidopsis. Seung D, et al. Plant Cell, 2018 Jul. PMID 29866647, Free PMC Article
    4. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
    5. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MFP1 is expressed in both nuclei and chloroplasts.
      Title: Dual location of MAR-binding, filament-like protein 1 in Arabidopsis, tobacco, and tomato.
    Submit: New GeneRIF Correction

    General gene information

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    NM_112470.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of starch biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within starch biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast thylakoid HDA PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 
    located_in chloroplast thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid nucleoid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MAR binding filament-like protein 1
    NP_188221.2
    • MAR binding filament-like protein 1 (MFP1); FUNCTIONS IN: DNA binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastid nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 259345 Blast hits to 118150 proteins in 3812 species: Archae - 3889; Bacteria - 64552; Metazoa - 100119; Fungi - 19969; Plants - 13824; Viruses - 1177; Other Eukaryotes - 55815 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5430758..5433851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112470.3 → NP_188221.2  MAR binding filament-like protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188221.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7Y1Z5, Q9LW85
      UniProtKB/TrEMBL
      A0A5S9XCX4, A0A654F9A6
      Conserved Domains (1) summary
      COG1196
      Location:277 → 633
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LW85.2

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