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    DMP2 transmembrane protein, putative (DUF679 domain membrane protein 2) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821709, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DMP2
    Official Full Name
    transmembrane protein, putative (DUF679 domain membrane protein 2)
    Primary source
    TAIR:AT3G21550
    Locus tag
    AT3G21550
    See related
    Araport:AT3G21550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis thaliana DUF679 domain membrane protein 2; AtDMP2; DUF679 domain membrane protein 2
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    Genomic context

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    See DMP2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (7591394..7592373, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DNAse I-like superfamily protein Neighboring gene transmembrane protein, putative (DUF679 domain membrane protein 1) Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene proline-rich nuclear receptor coactivator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression, localisation and phylogeny of a novel family of plant-specific membrane proteins. Kasaras A, et al. Plant Biol (Stuttg), 2010 Sep. PMID 20712629
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_113050.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in abscission IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in endomembrane system organization ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plant-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein, putative (DUF679 domain membrane protein 2)
    NP_566687.1
    • DUF679 domain membrane protein 2 (DMP2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: DUF679 domain membrane protein 1 (TAIR:AT3G21520.1); Has 265 Blast hits to 257 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 265; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7591394..7592373 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113050.3 → NP_566687.1  transmembrane protein, putative (DUF679 domain membrane protein 2) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566687.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVF1
      UniProtKB/TrEMBL
      A0A178VDX9, A0A5S9XEA4
      Conserved Domains (1) summary
      pfam05078
      Location:14 → 170
      DUF679; Protein of unknown function (DUF679)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVF1.1

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