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    PAP17 purple acid phosphatase 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821047, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PAP17
    Official Full Name
    purple acid phosphatase 17
    Primary source
    TAIR:AT3G17790
    Locus tag
    AT3G17790
    See related
    Araport:AT3G17790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATACP5; ATPAP17; purple acid phosphatase 17
    Summary
    Expression is upregulated in the shoot of cax1/cax3 mutant.
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    Genomic context

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    See PAP17 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (6089381..6091231)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Dihydroxyacetone kinase Neighboring gene B-cell receptor-associated-like protein Neighboring gene alanine-tRNA ligase, putative (DUF760) Neighboring gene ncRNA Neighboring gene pyrimidine 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A type 5 acid phosphatase gene from Arabidopsis thaliana is induced by phosphate starvation and by some other types of phosphate mobilising/oxidative stress conditions. del Pozo JC, et al. Plant J, 1999 Sep. PMID 10504579
    2. Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower. Zhu H, et al. Plant Mol Biol, 2005 Nov. PMID 16244908
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_112660.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acid phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables lactoperoxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within dephosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within intracellular phosphate ion homeostasis IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to hydrogen peroxide IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    purple acid phosphatase 17
    NP_566587.1
    • purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6089381..6091231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112660.6 → NP_566587.1  purple acid phosphatase 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566587.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFV2, Q9SCX8
      UniProtKB/TrEMBL
      A0A178VF50, A0A5S9XDH1
      Conserved Domains (1) summary
      cd07378
      Location:46 → 321
      MPP_ACP5; Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SCX8.1

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