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    IPT7 isopentenyltransferase 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821943, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IPT7
    Official Full Name
    isopentenyltransferase 7
    Primary source
    TAIR:AT3G23630
    Locus tag
    AT3G23630
    See related
    Araport:AT3G23630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 7; ATIPT7; isopentenyltransferase 7
    Summary
    Encodes an isopentenyl transferase involved in cytokinin biosynthesis.
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    Genomic context

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    See IPT7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (8488695..8490266)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene dual specificity protein phosphatase 1 Neighboring gene Ribosomal RNA processing Brix domain protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene F-box associated ubiquitination effector family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A PHABULOSA/cytokinin feedback loop controls root growth in Arabidopsis. Dello Ioio R, et al. Curr Biol, 2012 Sep 25. PMID 22902752
    2. Arabidopsis KNOXI proteins activate cytokinin biosynthesis. Yanai O, et al. Curr Biol, 2005 Sep 6. PMID 16139212
    3. Agrobacterium tumefaciens increases cytokinin production in plastids by modifying the biosynthetic pathway in the host plant. Sakakibara H, et al. Proc Natl Acad Sci U S A, 2005 Jul 12. PMID 15998742, Free PMC Article
    4. Distinct isoprenoid origins of cis- and trans-zeatin biosyntheses in Arabidopsis. Kasahara H, et al. J Biol Chem, 2004 Apr 2. PMID 14726522
    5. Roles of Arabidopsis ATP/ADP isopentenyltransferases and tRNA isopentenyltransferases in cytokinin biosynthesis. Miyawaki K, et al. Proc Natl Acad Sci U S A, 2006 Oct 31. PMID 17062755, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_113267.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables AMP dimethylallyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables ATP/ADP dimethylallyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytokinin biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within cytokinin biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube growth IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    isopentenyltransferase 7
    NP_566735.1
    • isopentenyltransferase 7 (IPT7); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 8574 Blast hits to 7864 proteins in 2586 species: Archae - 0; Bacteria - 5836; Metazoa - 176; Fungi - 188; Plants - 290; Viruses - 0; Other Eukaryotes - 2084 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8488695..8490266
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113267.3 → NP_566735.1  isopentenyltransferase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566735.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LA74, Q94ID1, Q9LUG4
      UniProtKB/TrEMBL
      A0A178V807, A0A5S9XFD1
      Conserved Domains (1) summary
      cl38936
      Location:31 → 297
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94ID1.2

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