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    Reticulon family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821480, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Reticulon family protein
    Primary source
    TAIR:AT3G19460
    Locus tag
    AT3G19460
    See related
    Araport:AT3G19460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (6747268..6749329)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pseudouridine synthase family protein Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene D-3-phosphoglycerate dehydrogenase Neighboring gene sodium:hydrogen antiporter 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084717.1
    NM_001338396.1
    NM_001338397.1
    NM_001338398.1
    NM_001338399.1
    NM_001338400.1
    NM_112833.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Reticulon family protein
    NP_001319591.1
    • Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1); Has 985 Blast hits to 985 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 550; Fungi - 0; Plants - 426; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
    NP_566635.1
    • Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1); Has 1108 Blast hits to 1108 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 644; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6747268..6749329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112833.4 → NP_566635.1  Reticulon family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566635.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LAT8, Q9LT71
      UniProtKB/TrEMBL
      A0A178VJ33, A0A5S9XDN3
      Conserved Domains (1) summary
      pfam02453
      Location:22 → 176
      Reticulon

    2. NM_001338397.1 → NP_001325447.1  Reticulon family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGH9, A0A1I9LL94, A0A384L0C6
      Conserved Domains (1) summary
      pfam02453
      Location:22 → 210
      Reticulon

    3. NM_001338398.1 → NP_001325445.1  Reticulon family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LAT8, Q9LT71
      UniProtKB/TrEMBL
      A0A178VJ33, A0A5S9XDN3
      Conserved Domains (1) summary
      pfam02453
      Location:22 → 176
      Reticulon

    4. NM_001338399.1 → NP_001325446.1  Reticulon family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LAT8, Q9LT71
      UniProtKB/TrEMBL
      A0A178VJ33, A0A5S9XDN3
      Conserved Domains (1) summary
      pfam02453
      Location:22 → 176
      Reticulon

    5. NM_001338400.1 → NP_001325444.1  Reticulon family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGH9, A0A1I9LL94, A0A384L0C6
      Conserved Domains (1) summary
      pfam02453
      Location:22 → 210
      Reticulon

    6. NM_001338396.1 → NP_001319591.1  Reticulon family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MR23
      Conserved Domains (1) summary
      pfam02453
      Location:6 → 194
      Reticulon; Reticulon

    7. NM_001084717.1 → NP_001078186.1  Reticulon family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078186.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MR23
      Conserved Domains (1) summary
      pfam02453
      Location:6 → 194
      Reticulon; Reticulon
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LT71.1

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