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    filament-like protein (DUF869) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821471, updated on 18-Sep-2024

    Summary

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    Official Full Name
    filament-like protein (DUF869)
    Primary source
    TAIR:AT3G19370
    Locus tag
    AT3G19370
    See related
    Araport:AT3G19370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (6710349..6713678)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene maternally expressed pab C-terminal Neighboring gene Zinc finger (CCCH-type) family protein Neighboring gene plant U-box 25 Neighboring gene Granulin repeat cysteine protease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001125188.1
    NM_001125189.2
    NM_112824.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    filament-like protein (DUF869)
    NP_001118660.1
    • Plant protein of unknown function (DUF869); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001118661.1
    • Plant protein of unknown function (DUF869); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_188568.1
    • Plant protein of unknown function (DUF869); LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1); Has 44099 Blast hits to 25548 proteins in 1425 species: Archae - 637; Bacteria - 4297; Metazoa - 22352; Fungi - 3568; Plants - 2188; Viruses - 105; Other Eukaryotes - 10952 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6710349..6713678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112824.5 → NP_188568.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188568.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VE99, A0A384KYY4, F4JB65, Q0WPV7
      Conserved Domains (1) summary
      pfam05911
      Location:125 → 616
      FPP; Filament-like plant protein, long coiled-coil

    2. NM_001125189.2 → NP_001118661.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118661.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VE99, A0A384KYY4, F4JB65, Q0WPV7
      Conserved Domains (1) summary
      pfam05911
      Location:125 → 616
      FPP; Filament-like plant protein, long coiled-coil

    3. NM_001125188.1 → NP_001118660.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118660.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VE99, A0A384KYY4, F4JB65, Q0WPV7
      Conserved Domains (1) summary
      pfam05911
      Location:125 → 616
      FPP; Filament-like plant protein, long coiled-coil
    Nucleotide Protein
    Heading Accession and Version

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