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    Adenosylmethionine decarboxylase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822144, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Adenosylmethionine decarboxylase family protein
    Primary source
    TAIR:AT3G25570
    Locus tag
    AT3G25570
    See related
    Araport:AT3G25570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (9287178..9289338, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene NSP-interacting kinase 2 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Miscellaneous features

    • Loc: c9288615-9288595 AT3G25570.uORF1-1
    • Loc: c9288871-9288728 AT3G25570.uORF1-2
    NM_001203043.1
    NM_113454.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables adenosylmethionine decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in spermine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Adenosylmethionine decarboxylase family protein
    NP_001189972.1
    • Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4).
    NP_189184.1
    • Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1034 Blast hits to 1011 proteins in 270 species: Archae - 0; Bacteria - 57; Metazoa - 222; Fungi - 155; Plants - 530; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9287178..9289338 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203043.1 → NP_001189972.1  Adenosylmethionine decarboxylase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189972.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LSU6
      UniProtKB/TrEMBL
      A0A654FAS8, A0A7G2EQF7
      Conserved Domains (1) summary
      PLN02524
      Location:1 → 346
      PLN02524; S-adenosylmethionine decarboxylase

    2. NM_113454.3 → NP_189184.1  Adenosylmethionine decarboxylase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189184.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LSU6
      UniProtKB/TrEMBL
      A0A654FAS8, A0A7G2EQF7
      Conserved Domains (1) summary
      PLN02524
      Location:1 → 346
      PLN02524; S-adenosylmethionine decarboxylase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LSU6.1

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