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    IAA2 indole-3-acetic acid inducible 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821877, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IAA2
    Official Full Name
    indole-3-acetic acid inducible 2
    Primary source
    TAIR:AT3G23030
    Locus tag
    AT3G23030
    See related
    Araport:AT3G23030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    indole-3-acetic acid inducible 2
    Summary
    auxin inducible gene expressed in the nucleus
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    Genomic context

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    See IAA2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (8180646..8182095, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene receptor like protein 36 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA Neighboring gene indole-3-acetic acid 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of gravitropic response indicator genes in Arabidopsis inflorescence stems. Taniguchi M, et al. Plant Signal Behav, 2014. PMID 25763694, Free PMC Article
    2. Early auxin-induced genes encode short-lived nuclear proteins. Abel S, et al. Proc Natl Acad Sci U S A, 1994 Jan 4. PMID 8278386, Free PMC Article
    3. The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana. Abel S, et al. J Mol Biol, 1995 Aug 25. PMID 7658471
    4. Protein-protein interactions among the Aux/IAA proteins. Kim J, et al. Proc Natl Acad Sci U S A, 1997 Oct 28. PMID 9342315, Free PMC Article
    5. AUXIN RESPONSE FACTOR8 regulates Arabidopsis petal growth by interacting with the bHLH transcription factor BIGPETALp. Varaud E, et al. Plant Cell, 2011 Mar. PMID 21421811, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_113203.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    indole-3-acetic acid inducible 2
    NP_188943.1
    • indole-3-acetic acid inducible 2 (IAA2); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible (TAIR:AT4G14560.1); Has 2163 Blast hits to 2162 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2162; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8180646..8182095 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338609.1 → NP_001326722.1  indole-3-acetic acid inducible 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQ54, A0A5S9XEY8
      Conserved Domains (1) summary
      pfam02309
      Location:101 → 254
      AUX_IAA; AUX/IAA family

    2. NM_113203.5 → NP_188943.1  indole-3-acetic acid inducible 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188943.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22596, P49678
      UniProtKB/TrEMBL
      A0A178V7I6, A0A654F9U5, D3K0A7, D3K0B1, E1A719, E1A722, E1A727
      Conserved Domains (1) summary
      pfam02309
      Location:14 → 167
      AUX_IAA; AUX/IAA family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P49678.3

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