U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MKS1 MAP kinase substrate 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821400, updated on 18-Sep-2024

    Summary

    Official Symbol
    MKS1
    Official Full Name
    MAP kinase substrate 1
    Primary source
    TAIR:AT3G18690
    Locus tag
    AT3G18690
    See related
    Araport:AT3G18690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAP kinase substrate 1
    Summary
    Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See MKS1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (6429534..6430517, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene plant glycogenin-like starch initiation protein 1 Neighboring gene Ankyrin repeat family protein Neighboring gene Amino acid kinase family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene plant U-box 29

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_112755.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    MAP kinase substrate 1
    NP_566616.1
    • MAP kinase substrate 1 (MKS1); CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G21326.1); Has 153 Blast hits to 153 proteins in 16 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6429534..6430517 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112755.2NP_566616.1  MAP kinase substrate 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566616.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGD5, Q9LSA8
      UniProtKB/TrEMBL
      A0A654FHG1
      Conserved Domains (1) summary
      pfam05678
      Location:7195
      VQ; VQ motif