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    D-ribose-binding periplasmic protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837594, updated on 18-Sep-2024

    Summary

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    Official Full Name
    D-ribose-binding periplasmic protein
    Primary source
    TAIR:AT1G10530
    Locus tag
    AT1G10530
    See related
    Araport:AT1G10530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T10O24.15; T10O24_15
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (3471456..3472674, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA polymerase lambda (POLL) Neighboring gene Serine/Threonine-kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene nucleobase-ascorbate transporter 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_100928.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    D-ribose-binding periplasmic protein
    NP_172523.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3471456..3472674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100928.4 → NP_172523.1  D-ribose-binding periplasmic protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172523.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WR91, A0A5S9TN87, A0A654E8Q7, Q7XJ59
      Conserved Domains (1) summary
      pfam14009
      Location:1 → 163
      DUF4228; Domain of unknown function (DUF4228)
    Nucleotide Protein
    Heading Accession and Version

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