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    CWLP cell wall-plasma membrane linker protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821775, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CWLP
    Official Full Name
    cell wall-plasma membrane linker protein
    Primary source
    TAIR:AT3G22120
    Locus tag
    AT3G22120
    See related
    Araport:AT3G22120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cell wall-plasma membrane linker protein
    Summary
    cell wall-plasma membrane linker protein homolog (CWLP)
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    Genomic context

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    See CWLP in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (7794758..7796460, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene 20S proteasome alpha subunit C1 Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_113109.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cell wall-plasma membrane linker protein
    NP_188851.2
    • cell wall-plasma membrane linker protein (CWLP); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22142.1); Has 335678 Blast hits to 95375 proteins in 3349 species: Archae - 1485; Bacteria - 89074; Metazoa - 114820; Fungi - 40290; Plants - 34776; Viruses - 9272; Other Eukaryotes - 45961 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7794758..7796460 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338564.1 → NP_001327425.1  cell wall-plasma membrane linker protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9E0, A0A1I9LSA3
      Conserved Domains (1) summary
      pfam14547
      Location:266 → 350
      Hydrophob_seed; Hydrophobic seed protein

    2. NM_113109.3 → NP_188851.2  cell wall-plasma membrane linker protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188851.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9E0, A0A654FAH6, Q9LIE9
      Conserved Domains (1) summary
      pfam14547
      Location:249 → 333
      Hydrophob_seed; Hydrophobic seed protein
    Nucleotide Protein
    Heading Accession and Version

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