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    BLOS1 GCN5L1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817583, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BLOS1
    Official Full Name
    GCN5L1 family protein
    Primary source
    TAIR:AT2G30330
    Locus tag
    AT2G30330
    See related
    Araport:AT2G30330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    BLOC subunit 1; T9D9.14; T9D9_14
    Summary
    Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport.
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    Genomic context

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    See BLOS1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (12928660..12929863, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase family protein Neighboring gene Pseudouridine synthase family protein Neighboring gene LOB domain-containing protein 13 Neighboring gene Excinuclease ABC, C subunit, N-terminal

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BLOS1, a putative BLOC-1 subunit, interacts with SNX1 and modulates root growth in Arabidopsis. Cui Y, et al. J Cell Sci, 2010 Nov 1. PMID 20971704
    2. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001336250.1
    NM_128586.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within endosomal transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in late endosome to vacuole transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BLOC-1 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of BLOC-1 complex TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in endosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GCN5L1 family protein
    NP_180592.1
    • GCN5L1 family protein; CONTAINS InterPro DOMAIN/s: GCN5-like 1 (InterPro:IPR009395); Has 190 Blast hits to 190 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 8; Plants - 43; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12928660..12929863 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128586.3 → NP_180592.1  GCN5L1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180592.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22929, Q0WNC8
      UniProtKB/TrEMBL
      A0A178VYH2, A0A5S9X2L4
      Conserved Domains (1) summary
      pfam06320
      Location:37 → 149
      GCN5L1; GCN5-like protein 1 (GCN5L1)

    2. NM_001336250.1 → NP_001324753.1  GCN5L1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B122
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O22929.1

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