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    GBF2 G-box binding factor 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826505, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GBF2
    Official Full Name
    G-box binding factor 2
    Primary source
    TAIR:AT4G01120
    Locus tag
    AT4G01120
    See related
    Araport:AT4G01120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBZIP54; BASIC REGION/LEUCINE ZIPPER MOTIF 5; F2N1.12; F2N1_12; G-box binding factor 2
    Summary
    bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light
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    Genomic context

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    See GBF2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    13
    Sequence:
    Chromosome: 4; NC_003075.7 (481569..484524, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF3133) Neighboring gene adenine nucleotide transporter 1 Neighboring gene late embryogenesis abundant hydroxyproline-rich glycoprotein family protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene transmembrane protein, putative (DUF1191)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein. Menkens AE, et al. Proc Natl Acad Sci U S A, 1994 Mar 29. PMID 8146148, Free PMC Article
    2. Heterodimerization between light-regulated and ubiquitously expressed Arabidopsis GBF bZIP proteins. Schindler U, et al. EMBO J, 1992 Apr. PMID 1373374, Free PMC Article
    3. Intracellular localization of GBF proteins and blue light-induced import of GBF2 fusion proteins into the nucleus of cultured Arabidopsis and soybean cells. Terzaghi WB, et al. Plant J, 1997 May. PMID 9193069
    4. AtbZIP16 and AtbZIP68, two new members of GBFs, can interact with other G group bZIPs in Arabidopsis thaliana. Shen H, et al. BMB Rep, 2008 Feb 29. PMID 18315949
    5. The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors. Gong W, et al. Mol Plant, 2008 Jan. PMID 19802365, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_116342.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within glucosinolate metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to blue light IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    G-box binding factor 2
    NP_192021.1
    • G-box binding factor 2 (GBF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 3 (TAIR:AT2G46270.2); Has 2070 Blast hits to 2052 proteins in 232 species: Archae - 2; Bacteria - 25; Metazoa - 517; Fungi - 137; Plants - 1237; Viruses - 1; Other Eukaryotes - 151 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      481569..484524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116342.3 → NP_192021.1  G-box binding factor 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192021.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42775
      UniProtKB/TrEMBL
      Q8LE35
      Conserved Domains (4) summary
      cd14702
      Location:252 → 301
      bZIP_plant_GBF1; coiled coil [structural motif]
      pfam00170
      Location:251 → 310
      bZIP_1; bZIP transcription factor
      pfam07777
      Location:1 → 95
      MFMR; G-box binding protein MFMR
      pfam16596
      Location:115 → 229
      MFMR_assoc; Disordered region downstream of MFMR
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42775.1

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