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    PIPK10 phosphatidylinositol phosphate kinase 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828066, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PIPK10
    Official Full Name
    phosphatidylinositol phosphate kinase 10
    Primary source
    TAIR:AT4G01190
    Locus tag
    AT4G01190
    See related
    Araport:AT4G01190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPIPK10; F2N1.9; F2N1_9; phosphatidylinositol phosphate kinase 10
    Summary
    Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.
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    Genomic context

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    See PIPK10 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (504135..506403, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene XH/XS domain-containing protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene glycosyl transferase family 1 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization and comparative analysis of Arabidopsis phosphatidylinositol phosphate 5-kinase 10 reveals differences in Arabidopsis and human phosphatidylinositol phosphate kinases. Perera IY, et al. FEBS Lett, 2005 Jun 20. PMID 15949803
    2. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
    3. Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta1 to the actin cytoskeleton. Davis AJ, et al. J Biol Chem, 2007 May 11. PMID 17379598
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis phosphatidylinositol phosphate (PtdInsP) kinase 10 (AtPIPK10; At4g01190) was cloned and characterized. [Arabidopsis phosphatidylinositol phosphate kinase 10 ] [AtPIPK10]
      Title: Characterization and comparative analysis of Arabidopsis phosphatidylinositol phosphate 5-kinase 10 reveals differences in Arabidopsis and human phosphatidylinositol phosphate kinases.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphatidylinositol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phosphatidylinositol phosphate biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phosphatidylinositol phosphate kinase 10
    NP_192028.1
    • phosphatidylinositol phosphate kinase 10 (PIPK10); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase, core (TAIR:AT1G01460.1); Has 1758 Blast hits to 1594 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 277; Plants - 390; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      504135..506403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340304.1 → NP_001329151.1  phosphatidylinositol phosphate kinase 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6V4, A0A5S9XQN5

    2. NM_001340305.1 → NP_001329152.1  phosphatidylinositol phosphate kinase 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6V4, A0A5S9XQN5

    3. NM_116349.1 → NP_192028.1  phosphatidylinositol phosphate kinase 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192028.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04613, Q9M149
      UniProtKB/TrEMBL
      A0A178V467
      Conserved Domains (1) summary
      smart00330
      Location:17 → 390
      PIPKc; Phosphatidylinositol phosphate kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M149.1

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