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    cytochrome-c oxidase/ electron carrier [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827858, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cytochrome-c oxidase/ electron carrier
    Primary source
    TAIR:AT4G21105
    Locus tag
    AT4G21105
    See related
    Araport:AT4G21105
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (11265479..11267056)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Dof-type zinc finger domain-containing protein Neighboring gene MITOCHONDRIAL FERREDOXIN 2 Neighboring gene damaged DNA binding protein 1B Neighboring gene G10 family protein Neighboring gene amino acid transporter 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    2. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084947.1
    NM_118229.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome-c oxidase/ electron carrier
    NP_001078416.1
    • cytochrome-c oxidases;electron carriers; FUNCTIONS IN: electron carrier activity, cytochrome-c oxidase activity; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIIa (InterPro:IPR003177); Has 60 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_567619.1
    • cytochrome-c oxidases;electron carriers; FUNCTIONS IN: electron carrier activity, cytochrome-c oxidase activity; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIIa (InterPro:IPR003177); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11265479..11267056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341471.1 → NP_001328537.1  cytochrome-c oxidase/ electron carrier [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V456, A0A384LLV4, Q8LCZ9, Q944S8
      Conserved Domains (1) summary
      pfam02238
      Location:11 → 63
      COX7a; Cytochrome c oxidase subunit VII

    2. NM_118229.4 → NP_567619.1  cytochrome-c oxidase/ electron carrier [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567619.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V456, A0A384LLV4, Q8LCZ9, Q944S8
      Conserved Domains (1) summary
      pfam02238
      Location:11 → 63
      COX7a; Cytochrome c oxidase subunit VII

    3. NM_001084947.1 → NP_001078416.1  cytochrome-c oxidase/ electron carrier [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078416.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MSE0
      Conserved Domains (1) summary
      cl02796
      Location:11 → 38
      Cyt_c_Oxidase_VIIa; Cytochrome c oxidase subunit VIIa. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...
    Nucleotide Protein
    Heading Accession and Version

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