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    Exostosin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829960, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Exostosin family protein
    Primary source
    TAIR:AT4G38040
    Locus tag
    AT4G38040
    See related
    Araport:AT4G38040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20D10.160; F20D10_160
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (17867438..17869542)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene tRNA/rRNA methyltransferase (SpoU) family protein Neighboring gene Rhamnogalacturonate lyase family protein Neighboring gene Xanthine/uracil permease family protein Neighboring gene uncharacterized protein Neighboring gene basic helix loop helix (bHLH) DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_119965.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi trans cisterna HDA PubMed 
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    Exostosin family protein
    NP_195517.1
    • Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17867438..17869542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342470.1 → NP_001328812.1  Exostosin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F3S8, C0Z2E1

    2. NM_119965.4 → NP_195517.1  Exostosin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195517.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXK7, A0A7G2F3S8, Q9SZK4
      Conserved Domains (1) summary
      pfam03016
      Location:100 → 378
      Exostosin; Exostosin family
    Nucleotide Protein
    Heading Accession and Version

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