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    CXE13 carboxyesterase 13 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824031, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CXE13
    Official Full Name
    carboxyesterase 13
    Primary source
    TAIR:AT3G48700
    Locus tag
    AT3G48700
    See related
    Araport:AT3G48700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCXE13; carboxyesterase 13
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    Genomic context

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    See CXE13 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (18038648..18039879, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene gamma carbonic anhydrase-like 2 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene DEK domain-containing chromatin associated protein Neighboring gene HXXXD-type acyl-transferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_114729.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carboxylesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    carboxyesterase 13
    NP_190439.1
    • carboxyesterase 13 (CXE13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48690.1); Has 10327 Blast hits to 10297 proteins in 1570 species: Archae - 114; Bacteria - 5663; Metazoa - 1261; Fungi - 886; Plants - 1402; Viruses - 3; Other Eukaryotes - 998 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18038648..18039879 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114729.3 → NP_190439.1  carboxyesterase 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190439.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SMM9
      UniProtKB/TrEMBL
      A0A178VBF6, A0A5S9XJ04, A0A654FE12
      Conserved Domains (1) summary
      pfam07859
      Location:77 → 305
      Abhydrolase_3; alpha/beta hydrolase fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SMM9.1

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