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    DUF1499 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825252, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF1499 family protein
    Primary source
    TAIR:AT3G60810
    Locus tag
    AT3G60810
    See related
    Araport:AT3G60810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (22470519..22471906)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DHHC-type zinc finger family protein Neighboring gene tRNA-Lys Neighboring gene N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Neighboring gene actin-related protein 7 Neighboring gene microtubule-associated protein 65-4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115945.3
    NM_202740.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    DUF1499 family protein
    NP_191640.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
    NP_974469.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22470519..22471906
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115945.3 → NP_191640.1  DUF1499 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191640.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V604, A0A384LPW6, Q9LZY2
      Conserved Domains (1) summary
      pfam07386
      Location:79 → 203
      DUF1499; Protein of unknown function (DUF1499)

    2. NM_202740.2 → NP_974469.1  DUF1499 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974469.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JCZ8
      Conserved Domains (1) summary
      pfam07386
      Location:74 → 198
      DUF1499; Protein of unknown function (DUF1499)
    Nucleotide Protein
    Heading Accession and Version

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