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    LAX1 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831866, updated on 18-Sep-2024

    Summary

    Official Symbol
    LAX1
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G01240
    Locus tag
    AT5G01240
    See related
    Araport:AT5G01240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7J8.220; F7J8_220; like AUXIN RESISTANT 1
    Summary
    Encodes LAX1 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
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    Genomic context

    See LAX1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (97536..101835)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene josephin-like protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene ncRNA Neighboring gene alpha 1,4-glycosyltransferase family protein Neighboring gene Carbohydrate-binding-like fold

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    NM_120202.5
    NM_202990.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in plasma membrane PubMed 
    located_in plasma membrane  

    General protein information

    Preferred Names
    uncharacterized protein
    NP_195744.1
    • like AUXIN RESISTANT 1 (LAX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G38120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_974719.1
    • like AUXIN RESISTANT 1 (LAX1); FUNCTIONS IN: transporter activity; INVOLVED IN: amino acid transport, root cap development; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G38120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      97536..101835
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120202.5 → NP_195744.1  uncharacterized protein AT5G01240 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195744.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LFB2, Q9SMW2
      UniProtKB/TrEMBL
      A0A178UP16
      Conserved Domains (1) summary
      PLN03074
      Location:1 → 474
      PLN03074; auxin influx permease; Provisional
    2. NM_202990.2 → NP_974719.1  uncharacterized protein AT5G01240 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974719.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FXP6, F4K7Z8
      Conserved Domains (1) summary
      PLN03074
      Location:1 → 394
      PLN03074; auxin influx permease; Provisional
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