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    ABCG22 ABC-2 type transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830541, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCG22
    Official Full Name
    ABC-2 type transporter family protein
    Primary source
    TAIR:AT5G06530
    Locus tag
    AT5G06530
    See related
    Araport:AT5G06530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis thaliana ATP-binding cassette G22; AtABCG22; ATP-binding cassette G22; F15M7.6; F15M7_6
    Summary
    Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility.
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    Genomic context

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    See ABCG22 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (1989650..1994961, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclear factor Y, subunit A10 Neighboring gene SWAP (Suppressor-of-White-APricot)/surp domain-containing protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene transferring glycosyl group transferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional relationship of AtABCG21 and AtABCG22 in stomatal regulation. Kuromori T, et al. Sci Rep, 2017 Oct 2. PMID 28970576, Free PMC Article
    2. Arabidopsis mutants of AtABCG22, an ABC transporter gene, increase water transpiration and drought susceptibility. Kuromori T, et al. Plant J, 2011 Sep. PMID 21575091
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036766.2
    NM_001342884.1
    NM_120736.3
    NM_180450.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within transpiration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ABC-2 type transporter family protein
    NP_001031843.1
    • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink).
    NP_568169.1
    • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_850781.2
    • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 406769 Blast hits to 368814 proteins in 4158 species: Archae - 7190; Bacteria - 320402; Metazoa - 9392; Fungi - 6664; Plants - 5687; Viruses - 7; Other Eukaryotes - 57427 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1989650..1994961 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120736.3 → NP_568169.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568169.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93YS4, Q94EX0, Q9FG17
      UniProtKB/TrEMBL
      A0A654FYZ0, A0A7G2FCT2, B9DH73
      Conserved Domains (1) summary
      PLN03211
      Location:112 → 748
      PLN03211; ABC transporter G-25; Provisional

    2. NM_001036766.2 → NP_001031843.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031843.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FCT2
      Conserved Domains (3) summary
      COG1131
      Location:176 → 457
      CcmA; ABC-type multidrug transport system, ATPase component [Defense mechanisms]
      pfam01061
      Location:503 → 679
      ABC2_membrane; ABC-2 type transporter
      cl21455
      Location:176 → 385
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    3. NM_001342884.1 → NP_001330485.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAZ0

    4. NM_180450.2 → NP_850781.2  ABC-2 type transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850781.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93YS4, Q94EX0, Q9FG17
      UniProtKB/TrEMBL
      A0A654FYZ0, A0A7G2FCT2, B9DH73
      Conserved Domains (1) summary
      PLN03211
      Location:112 → 748
      PLN03211; ABC transporter G-25; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93YS4.1

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