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    proline-rich family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830593, updated on 18-Sep-2024

    Summary

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    Official Full Name
    proline-rich family protein
    Primary source
    TAIR:AT5G07020
    Locus tag
    AT5G07020
    See related
    Araport:AT5G07020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MOJ9.19; MOJ9_19
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (2180501..2182538, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MPH1 is a thylakoid membrane protein involved in protecting photosystem II from photodamage in land plants. Liu J, et al. Plant Signal Behav, 2015. PMID 26337456, Free PMC Article
    2. A land plant-specific thylakoid membrane protein contributes to photosystem II maintenance in Arabidopsis thaliana. Liu J, et al. Plant J, 2015 Jun. PMID 25846821
    3. High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. Giacomelli L, et al. Plant Physiol, 2006 Jun. PMID 16648217, Free PMC Article
    4. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
    5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These data add further evidence that MPH1 is involved in PSII photoprotection in Arabidopsis. [MPH1]
      Title: MPH1 is a thylakoid membrane protein involved in protecting photosystem II from photodamage in land plants.
    2. A role for AT5G07020 in the protection and stabilization of photosystem II under high-light stress.AT5G07020 is a specific thylakoid membrane protein, which contributes to photosystem II maintenance.
      Title: A land plant-specific thylakoid membrane protein contributes to photosystem II maintenance in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_120784.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of protein complex stability IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid membrane HDA PubMed 
    located_in chloroplast thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in thylakoid HDA PubMed 

    General protein information

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    Preferred Names
    proline-rich family protein
    NP_568178.1
    • proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2180501..2182538 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120784.4 → NP_568178.1  proline-rich family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568178.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDY0, Q9FL44
      UniProtKB/TrEMBL
      A0A178UPG6, A0A5S9Y2D5, A0A654FZ42
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FL44.1

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