U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FLA21 FASCICLIN-like arabinogalactan protein 21 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830583, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    FLA21
    Official Full Name
    FASCICLIN-like arabinogalactan protein 21 precursor
    Primary source
    TAIR:AT5G06920
    Locus tag
    AT5G06920
    See related
    Araport:AT5G06920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FASCICLIN-like arabinogalactan protein 21 precursor; MOJ9.9; MOJ9_9
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FLA21 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (2142858..2143919)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 712, subfamily A, polypeptide 2 Neighboring gene J-domain protein 6 Neighboring gene nucleolar-like protein Neighboring gene Leucine-rich repeat receptor-like protein kinase family protein Neighboring gene bZIP transcription factor family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    NM_120774.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    FASCICLIN-like arabinogalactan protein 21 precursor
    NP_196309.1
    • FASCICLIN-like arabinogalactan protein 21 precursor (FLA21); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2142858..2143919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120774.1 → NP_196309.1  FASCICLIN-like arabinogalactan protein 21 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196309.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FL53
      UniProtKB/TrEMBL
      A0A178UFX9, A0A5S9Y2C5
      Conserved Domains (1) summary
      smart00554
      Location:83 → 181
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FL53.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools