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    Plant calmodulin-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830675, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant calmodulin-binding protein-like protein
    Primary source
    TAIR:AT5G07820
    Locus tag
    AT5G07820
    See related
    Araport:AT5G07820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13G24.20; F13G24_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (2498550..2501253, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein Neighboring gene glucuronidase 2 Neighboring gene Ankyrin repeat family protein Neighboring gene HXXXD-type acyl-transferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_120864.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Plant calmodulin-binding protein-like protein
    NP_196399.1
    • Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G61260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2498550..2501253 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120864.5 → NP_196399.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196399.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UEC3, A0A5S9Y2C1, Q9SDA2
      Conserved Domains (1) summary
      cl23944
      Location:421 → 535
      CaM_binding; Plant calmodulin-binding domain
    Nucleotide Protein
    Heading Accession and Version

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