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    formin homology 2 domain-containing protein / FH2 domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830669, updated on 18-Sep-2024

    Summary

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    Official Full Name
    formin homology 2 domain-containing protein / FH2 domain-containing protein
    Primary source
    TAIR:AT5G07760
    Locus tag
    AT5G07760
    See related
    Araport:AT5G07760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MBK20.22; MBK20_22
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    26
    Sequence:
    Chromosome: 5; NC_003076.8 (2468040..2473843)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene actin binding protein Neighboring gene Actin-binding FH2 protein Neighboring gene Actin-binding FH2 (formin homology 2) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Formin homology 2 domains occur in multiple contexts in angiosperms. Cvrcková F, et al. BMC Genomics, 2004 Jul 15. PMID 15256004, Free PMC Article
    2. Formins: intermediates in signal-transduction cascades that affect cytoskeletal reorganization. Deeks MJ, et al. Trends Plant Sci, 2002 Nov. PMID 12417149
    3. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables actin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast stroma HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    formin homology 2 domain-containing protein / FH2 domain-containing protein
    NP_196393.2
    • formin homology 2 domain-containing protein / FH2 domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07650.1); Has 48311 Blast hits to 23266 proteins in 1185 species: Archae - 68; Bacteria - 7011; Metazoa - 18492; Fungi - 4245; Plants - 10792; Viruses - 1661; Other Eukaryotes - 6042 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2468040..2473843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120858.3 → NP_196393.2  formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196393.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y2L4
      Conserved Domains (2) summary
      pfam02181
      Location:522 → 805
      FH2; Formin Homology 2 Domain
      cl19758
      Location:127 → 481
      FH2; Formin Homology 2 Domain

    2. NM_001342959.1 → NP_001331313.1  formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BDL7, A0A5S9Y2L4
    Nucleotide Protein
    Heading Accession and Version

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