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    ARD4 RmlC-like cupins superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834407, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARD4
    Official Full Name
    RmlC-like cupins superfamily protein
    Primary source
    TAIR:AT5G43850
    Locus tag
    AT5G43850
    See related
    Araport:AT5G43850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATARD4; MQD19.21; MQD19_21
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    Genomic context

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    See ARD4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (17627132..17629363, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene aluminum induced protein with YGL and LRDR motifs Neighboring gene heat shock transcription factor A6A Neighboring gene auxin canalization protein (DUF828) Neighboring gene chlorophyllase 2 Neighboring gene methyl-coenzyme M reductase II subunit gamma, putative (DUF3741)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of methionine recycling for ethylene synthesis in Arabidopsis. Bürstenbinder K, et al. Plant J, 2007 Jan. PMID 17144895
    2. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_123752.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acireductone dioxygenase [iron(II)-requiring] activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-methionine salvage from methylthioadenosine IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RmlC-like cupins superfamily protein
    NP_568630.1
    • ARD4; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: L-methionine salvage from methylthioadenosine, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acireductone dioxygenase, ARD (InterPro:IPR004313), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G14710.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17627132..17629363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123752.4 → NP_568630.1  RmlC-like cupins superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568630.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H185, Q8LCE2, Q9FG79
      UniProtKB/TrEMBL
      A0A178UBZ4
      Conserved Domains (1) summary
      pfam03079
      Location:4 → 158
      ARD; ARD/ARD' family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H185.1

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