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    Xanthine/uracil permease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835063, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Xanthine/uracil permease family protein
    Primary source
    TAIR:AT5G49990
    Locus tag
    AT5G49990
    See related
    Araport:AT5G49990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K9P8.13; K9P8_13
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    15
    Sequence:
    Chromosome: 5; NC_003076.8 (20337586..20342035, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pyridoxin (pyrodoxamine) 5'-phosphate oxidase Neighboring gene auxin F-box protein 5 Neighboring gene Protein kinase superfamily protein Neighboring gene transcription factor bHLH145

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001344866.1
    NM_001344867.1
    NM_001344868.1
    NM_124378.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Xanthine/uracil permease family protein
    NP_199810.2
    • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G62890.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20337586..20342035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124378.6 → NP_199810.2  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199810.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWE9, Q9FGR4
      UniProtKB/TrEMBL
      A0A178UII4, A0A5S9YDR9
      Conserved Domains (1) summary
      cl23746
      Location:33 → 438
      Xan_ur_permease; Permease family

    2. NM_001344866.1 → NP_001330797.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWE9, Q9FGR4
      UniProtKB/TrEMBL
      A0A178UII4, A0A5S9YDR9
      Conserved Domains (1) summary
      cl23746
      Location:33 → 438
      Xan_ur_permease; Permease family

    3. NM_001344867.1 → NP_001330799.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWE9, Q9FGR4
      UniProtKB/TrEMBL
      A0A178UII4, A0A5S9YDR9
      Conserved Domains (1) summary
      cl23746
      Location:33 → 438
      Xan_ur_permease; Permease family

    4. NM_001344868.1 → NP_001330798.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWE9, Q9FGR4
      UniProtKB/TrEMBL
      A0A178UII4, A0A5S9YDR9
      Conserved Domains (1) summary
      cl23746
      Location:33 → 438
      Xan_ur_permease; Permease family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RWE9.1

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