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    CYP96A4 cytochrome P450, family 96, subfamily A, polypeptide 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835308, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP96A4
    Official Full Name
    cytochrome P450, family 96, subfamily A, polypeptide 4
    Primary source
    TAIR:AT5G52320
    Locus tag
    AT5G52320
    See related
    Araport:AT5G52320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 96; K24M7.5; K24M7_5; polypeptide 4; polypeptide 4''; subfamily A
    Summary
    member of CYP96A
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    Genomic context

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    See CYP96A4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (21244723..21246774, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CAP160 protein Neighboring gene low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) Neighboring gene TRAF-like superfamily protein Neighboring gene exocyst subunit exo70 family protein A2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis cytochrome P450 enzyme CYP96A4 is involved in the wound-induced biosynthesis of cuticular wax and cutin monomers. Huang H, et al. Plant J, 2024 Jun. PMID 38456566
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The Arabidopsis cytochrome P450 enzyme CYP96A4 is involved in the wound-induced biosynthesis of cuticular wax and cutin monomers.
      Title: The Arabidopsis cytochrome P450 enzyme CYP96A4 is involved in the wound-induced biosynthesis of cuticular wax and cutin monomers.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_124611.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cutin-based cuticle development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to jasmonic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome P450, family 96, subfamily A, polypeptide 4
    NP_200045.1
    • ''cytochrome P450, family 96, subfamily A, polypeptide 4'' (CYP96A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 3 (TAIR:AT1G65340.1); Has 28681 Blast hits to 28604 proteins in 1474 species: Archae - 45; Bacteria - 2612; Metazoa - 10653; Fungi - 6357; Plants - 7925; Viruses - 3; Other Eukaryotes - 1086 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21244723..21246774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344993.1 → NP_001330249.1  cytochrome P450, family 96, subfamily A, polypeptide 4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BA57, Q8GXI6
      Conserved Domains (1) summary
      cl12078
      Location:1 → 496
      p450; Cytochrome P450

    2. NM_124611.3 → NP_200045.1  cytochrome P450, family 96, subfamily A, polypeptide 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200045.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UE51, Q8GXI6, Q9FHC8
      Conserved Domains (1) summary
      cl12078
      Location:1 → 501
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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